河南农业科学 ›› 2021, Vol. 50 ›› Issue (7): 161-167.DOI: 10.15933/j.cnki.1004-3268.2021.07.019

• 畜牧·兽医 • 上一篇    下一篇

5 个绵羊群体GDF9 基因多态性与产羔数的关联分析

邵顺成,康晓龙,闫背背,张天闻,梁鹏,邹诗凡,孟科,荣轩,强浩,冯登侦,李新海   

  1. (宁夏大学农学院,宁夏银川750000)
  • 收稿日期:2021-01-20 出版日期:2021-07-15 发布日期:2021-07-15
  • 通讯作者: 冯登侦(1965-),男,内蒙古阿左旗人,教授,硕士,主要从事动物遗传与育种研究。E-mail:fdzh126@sohu.com 李新海(1979-),男,山东潍坊人,副教授,博士,主要从事动物遗传与育种研究。E-mail:zhumei185@163.com
  • 作者简介:邵顺成(1995-),男,宁夏西吉人,在读硕士研究生,研究方向:动物遗传育种与繁殖。E-mail:2550795885@qq.com
  • 基金资助:
    宁夏回族自治区农业育种专项(NXNYYZ20150101)

Association Analysis of GDF9 Gene Polymorphism and Lambing Size in Five Sheep Populations

SHAO Shuncheng,KANG Xiaolong,YAN Beibei,ZHANG Tianwen,LIANG Peng,ZOU Shifan,MENG Ke,RONG Xuan,QIANG Hao,FENG Dengzhen,LI Xinhai#br#   

  1. (College of Agronomy,Ningxia University,Yinchuan 750000,China)
  • Received:2021-01-20 Published:2021-07-15 Online:2021-07-15

摘要: 为探究绵羊GDF9 基因编码区多态性与繁殖性能的遗传效应,以杜泊羊、滩寒羊、杂一代、杂二代和横交一代5个绵羊群体为研究对象,利用Sequenom Mass ARRAY® SNP技术对5个绵羊群体GDF9 基因的4个错义突变位点进行检测,并与产羔数进行关联分析。结果显示,rs425223128、rs597009987和 rs415699275位点基因型均为纯合型,rs160076408位点在5个群体中存在CC、TC、TT等3种基因型。对 rs160076408位点不同基因型与5个群体的产羔数进行关联分析,结果表明,rs160076408位点在杂一代群体中与产羔数有一定的关联性,其中TC 基因型产羔数显著高于CC 基因型(P<0.05)。可见, rs160076408位点适用于杂一代绵羊群体多羔性状的选育。生物信息学分析表明,绵羊GDF9蛋白理论等电点为9.08,不稳定系数为54.43,为不稳定的碱性蛋白;脂肪系数为77.31,总平均亲水性为-0.404。 rs160076408位点突变前后GDF9蛋白的二级结构类型发生了变化。蛋白质互作网络分析表明,GDF9 蛋白与调控动物繁殖的相关蛋白质互作。

关键词: 绵羊, GDF9 基因, 多态性, 产羔数, 生物信息学分析

Abstract: In order to explore the genetic effect of GDF9 gene coding region polymorphism and reproductive performance in sheep,five sheep populations of Dorper sheep,hybrid of Tan and Han sheep,hybrid F1 generation,hybrid F2 generation and cross H1 generation were used to detect four missense mutations in GDF9 gene by Sequenom Mass ARRAY® SNP technique,and their association with litter size was analyzed. The results showed that the genotypes of rs425223128,rs597009987 and rs415699275 loci were all homozygous,and there were CC,TC and TT genotypes at rs160076408 locus in five populations. The association analysis between different genotypes of rs160076408 locus and litter size of five populations showed that there was a certain correlation between rs160076408 locus and litter size in hybrid F1 generation population,in which the litter size of TC genotype was significantly higher than that of CC genotype(P<0.05). It could be seen that the rs160076408 locus was suitable for the breeding of multi⁃lamb trait in the hybrid F1 generation of sheep. Bioinformatics analysis results showed that the theoretical isoelectric point of sheep GDF9 protein was 9.08,the instability coefficient was 54.43,the fat coefficient was 77.31,and the total average hydrophilicity was -0.404. The secondary structure of GDF9 protein changed before and after rs160076408 locus mutation. Protein interaction network analysis showed that GDF9 protein interacted with proteins related to animal reproduction.

Key words: Sheep, GDF9 gene, Polymorphism, Lambing number, Bioinformatics

中图分类号: